BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB019D02LP1|AL427469
(994 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1295 996 0.0
3x_Contig1532 666 0.0
>3x_Contig1295
Length = 7117
Score = 996 bits (501), Expect = 0.0
Identities = 514/518 (99%), Gaps = 2/518 (0%)
Strand = Plus / Plus
Query: 3 catttctctctttccgaattccattgttggcaacaggctggtggctccgcm--tctaggc 60
|||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 6504 catttctctctttccgaattccattgctggcaacaggctggtggctccgccactctaggc 6563
Query: 61 aggaatccagttcgcaattccagcctggaaactctatctctaggtggggatggactgttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6564 aggaatccagttcgcaattccagcctggaaactctatctctaggtggggatggactgttc 6623
Query: 121 ctaggcaattcctcttccaccacaggtaaccatccgtagtaaccttcgtaccatgggcgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6624 ctaggcaattcctcttccaccacaggtaaccatccgtagtaaccttcgtaccatgggcgc 6683
Query: 181 cgccagtttcacaaggtcctcggacacaacccaaacacaccgtctcagcatagtggtgag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6684 cgccagtttcacaaggtcctcggacacaacccaaacacaccgtctcagcatagtggtgag 6743
Query: 241 cctctggtgtactctgaggcgaccgtggttcccacctctctctggctgagaggtttctac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6744 cctctggtgtactctgaggcgaccgtggttcccacctctctctggctgagaggtttctac 6803
Query: 301 ccttggaagtttgttagaatttgaaaattatcatggaaaaagaattagagattacaattt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6804 ccttggaagtttgttagaatttgaaaattatcatggaaaaagaattagagattacaattt 6863
Query: 361 gtatggtacaaggtagttaacaagtgtatttcatgtgtatagtcttgatttactgttgat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6864 gtatggtacaaggtagttaacaagtgtatttcatgtgtatagtcttgatttactgttgat 6923
Query: 421 taggttgttattaggatatttagttcagacaaaagcaagcaaagtcgaagatgtctactg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6924 taggttgttattaggatatttagttcagacaaaagcaagcaaagtcgaagatgtctactg 6983
Query: 481 tcccaagtgtccaagtatgttaaaacaacgaatgaaca 518
||||||||||||||||||||||||||||||||||||||
Sbjct: 6984 tcccaagtgtccaagtatgttaaaacaacgaatgaaca 7021
>3x_Contig1532
Length = 7463
Score = 666 bits (335), Expect = 0.0
Identities = 348/355 (98%)
Strand = Plus / Plus
Query: 640 agagcgtgtgtgtttcaagttctatcgctaagcaatgaccgatttgctcgtgatagcatg 699
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 agagcgtgtgtgtttcaagttctatcgctaagcaatgaccgatttgctcgtgatagcatg 64
Query: 700 aacaaattaaatgtggattgaacctaccatataatgagaatcaccgaagaaaacaggatg 759
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 65 aacaaattaaatgtggattgaacctaccatataatgagaatcaccgaaggaaacaggatg 124
Query: 760 tggtaaaaagataccagacaagatttgattaaggggaatcaccgtaatataccatttgta 819
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 tggtaaaaagataccagacaagatttgattaaggggaatcaccgtaatataccatttgta 184
Query: 820 taatgtgggctatccaaaaccactctgacagaatcatttcaccaccagtwacaccagtta 879
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct: 185 taatgtgggctatccaaaaccactctgacagaatcatttcaccaccagtaacaccagtaa 244
Query: 880 ggatattcaggctatttataactaagaagsmaatgacctccaaagatgttatcgacgtgt 939
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 245 ggatattcaggctatttataactaagaagcaaatgacctccaaagatgttatcgacgtgt 304
Query: 940 atgaaacggttcaaatacccacctttctggcatcacctatgttttawgtcaaggg 994
||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 305 atgaaacggttcaaatacccacctttctggcatcacctatgtttttagtcaaggg 359
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6336
Number of Sequences: 1807
Number of extensions: 6336
Number of successful extensions: 36
Number of sequences better than 1.0e-20: 2
length of query: 994
length of database: 10,358,551
effective HSP length: 16
effective length of query: 978
effective length of database: 10,329,639
effective search space: 10102386942
effective search space used: 10102386942
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)